EP 67: Pathogen Genomics for Infection Prevention and Control with Ellie Carter

EP 67: Pathogen Genomics for Infection Prevention and Control with Ellie Carter

From the bioinformatics lab by The Bioinformatics Lab

January 6, 2026 · 51 min

About this episode

Ellie Carter discusses the role of pathogen genomics in infection prevention and control within healthcare settings.

Ellie's background in microbiology and public health shaped her career in infection prevention. Building a laboratory network in Indiana was a significant project that enhanced public health. Infection preventionists play a crucial role in managing outbreaks in healthcare settings. Genomic sequencing is becoming increasingly important in identifying and controlling infections. Current outbreak detection methods in healthcare are often limited and retrospective. APIC 2024 highlighted the potential of genomic epidemiology in healthcare. Cost-effectiveness is a key factor in adopting genomic sequencing in hospitals. Challenges include financial investment and the need for bioinformatics expertise. Healthcare systems must learn from public health to implement genomic sequencing effectively. The ultimate goal is to prevent harm to patients through better infection control practices.

People in this episode

Guest: Ellie Carter

Topics covered

  • pathogen genomics
  • infection prevention
  • public health
  • genomic sequencing
  • healthcare outbreaks
  • bioinformatics

Keywords

  • infection control
  • genomic epidemiology
  • healthcare systems
  • outbreak detection
  • bioinformatics expertise

Mentioned in this episode

Organizations: APIC

Places: Indiana

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